Re: [Artemis-users] Run functional on a Mac?

[Michael Herron]

Thanks for the info.  I had read the same stuff, but I took a different meaning from it.  Thanks for setting me straight. On Oct 6, 2006, at 3:49 AM, Tim Carver wrote: Hi Michael The run menu can be made to work. You can use the standard UNIX artemis download and follow the instructions at: http://www.sanger.ac.uk/Software/Artemis/v8/manual/runmenu.html Alternatively if you are using the MacOSX disk image (artemis_act.dmg) and want to activate BLAST and Fasta searches for Uniprot: download and install fasta ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/fasta34t26b2.shar.Z Put this in Artemis.app/Contents/fasta and: uncompress fasta34t26b2.shar.Z cat fasta34t26b2.shar | sh make -f Makefile.os_x all 2. download and install blast ftp://ftp.ncbi.nih.gov/blast/executables/LATEST/blast-2.2.14-universal-macosx.tar.gz Extract the tar ball: tar zxvf blast-2.2.14-universal-macosx.tar.gz Move the contents of the directory created (blast-2.2.14) to Artemis.app/Contents/blast-2.2.11 3. set up uniprot database You can do this by using the setup_dbs.sh script in Artemis.app/Contents/blast-data cd Artemis.app/Contents/blast-data ./setup_dbs.sh Regards Tim Carver On 5/10/06 19:39, "Michael Herron" <[EMAIL PROTECTED]> wrote: Can the items on the "Run" menu be made to work on an OSX macintosh?   Michael J. Herron,  U of MN, Dept. of Entomology   [EMAIL PROTECTED]      612-624-3688 (office) 612-625-5299 (FAX)   _______________________________________________ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users Michael J. Herron,  U of MN, Dept. of Entomology   [EMAIL PROTECTED]      612-624-3688 (office) 612-625-5299 (FAX)

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