Hi Aparna
To be able to run blast you need to download blast and set up and format
your databases. You add the database to the Run menu by editing
'etc/options' and you need to edit the associated run_blastp/run_blastn
script for your site. (This means that you need to running this on a UNIX
platforrm.)
There is documentation at:
http://www.sanger.ac.uk/Software/Artemis/v10/manual/runmenu.html#RUNMENU-CONFIGURATION
The best way to test the script is to intially run it from the command
line as described.
Regards
Tim
On Fri, 19 Dec 2008, Aparna Pallavajjala wrote:
Hi Can any one give me a format to set the blast commands(run_program.sh files
) in 'Run' window?
Thanks in advance,
Aparna
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