I thought Procheck was pre-war, and we should all be using Molprobity
these day?
Andreas
On 11/12/2014 9:19, Evgeny Osipov wrote:
Dear Patrick,
Try to use procheck from ccp4:
Correct usage is:
procheck filename [chain] resolution
where filename = the coordinates file in Brookhaven format
[chain] = an optional one-letter chain-ID
resolution = a real number giving the resolution
of the structure
For example:-
procheck /data/pdb/p1amt.pdb A 1.5
It also generates a few other useful charts for your structure
On 09.12.2014 18:47, PC wrote:
Hi guys,
Sorry for the repost in COOT/CCP4/PHENIX.
It is possible on of the users in one of these communities might know
the answer
I was wondering if there is a small script I can use to generate the
outline of the allowed regions of Ramachandran map on to which I can
superimpose my coordinates phi and psi?
Something like what appears in COOT->Validate->Ramachandran Plot.
How does one generate such images for publications?
Thank you,
Patrick
____________________________________________________________
FREE 3D EARTH SCREENSAVER - Watch the Earth right on your desktop!
Check it out at http://www.inbox.com/earth
--
Andreas Förster
X-ray Crystallography Facility Manager
Centre for Structural Biology
Imperial College London
