On 19/02/15 21:03, Phoebe A. Rice wrote:
When trying to adjust the "chi" angles of a dT in coot 0.8.1, the methyl and its H's (which I called C5M to make phenix happy) rotate with the sugar, producing a rather base bizarre geometry.
Hello Phoebe, I suspect things are going wrong because C7 is called C5M in your pdb file. I think dTs should be now DTs in Coot. Paul. p.s. "chi" - yes :-/