Dear Manoj,
I usually utilize SALIGN to produce structure-based sequence alignments:
https://modbase.compbio.ucsf.edu/salign/
Ciao
Pietro
On 02-03-2023 08:45, Manoj N wrote:
Dear all,
We want to generate a structure-based multiple
sequence alignment for a large number of homologous structures (>100).
What are the available programs (stand-alone or webserver) to do this?
Thank you,
Best wishes,
Manoj
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