Lei Jin wrote:

I have two questions here:

1. Where is the COOT for MAC OSX? I just could not find it, although I could find COOT for Windows and Linux at http://www.biop.ox.ac.uk/coot/software/binaries/releases/


See the FAQ:

http://www.biop.ox.ac.uk/coot/doc/coot-faq.html#SEC3

2. Using baton to build Calpha model (tracing the polypeptide chain): after skeletonizing the map, when I use baton, I have to choose a few positions determined by the program for the end point of the baton. How can I rotate the baton and decide where the end point is by myself?



See Section 5.7 of the User Manual.

http://www.biop.ox.ac.uk/coot/doc/coot/Baton-Building.html#Baton-Building

Lots of snow here.   Nottingham?  Hmm....

Paul.

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