hello paul and coot developers while building rev 678{1,2}, I get the following errors (actually, the error is the same at three different points in sequence during the build):
---8<----------- /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_exec' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_open' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_free' collect2: error: ld returned 1 exit status make[2]: *** [Makefile:823: mini-rsr-bin] Error 1 make[2]: Leaving directory '/home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/ideal' ---8<----------- ---8<----------- /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_exec' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_open' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_free' collect2: error: ld returned 1 exit status make[2]: *** [Makefile:756: lidia] Error 1 make[2]: Leaving directory '/home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lbg' ---8<----------- ---8<----------- /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_exec' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_open' /home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/lidia-core/.libs/libcoot-lidia-core.so: undefined reference to `sqlite3_free' collect2: error: ld returned 1 exit status make[2]: *** [Makefile:1379: coot-density-score-by-residue-bin] Error 1 make[2]: Leaving directory '/home/balducci/tmp/install-us-d/coot-6762.d/coot-6781/src' ---8<----------- The following fixes everything for me: diff -c ideal/Makefile.am.ORIG ideal/Makefile.am *** ideal/Makefile.am.ORIG Sun Jun 18 11:26:52 2017 --- ideal/Makefile.am Sun Jun 18 12:55:22 2017 *************** *** 126,131 **** --- 126,132 ---- $(top_builddir)/mini-mol/libcoot-mini-mol.la \ $(GLOB_LIBS) \ $(RDKIT_LIBS) \ + $(SQLITE3_LIBS) \ $(CLIPPER_LIBS) $(MMDB_LIBS) $(GSL_LIBS) #test_indexing_LDADD = \ diff -c lbg/Makefile.am.ORIG lbg/Makefile.am *** lbg/Makefile.am.ORIG Sun Jun 18 11:26:52 2017 --- lbg/Makefile.am Sun Jun 18 12:55:22 2017 *************** *** 86,92 **** $(top_builddir)/utils/libcoot-utils.la \ $(top_builddir)/lidia-core/libcoot-lidia-core.la \ $(GLOB_LIBS) $(CLIPPER_LIBS) $(MMDB_LIBS) $(GSL_LIBS) \ ! $(RDKIT_LIBS) $(L_BOOST_PYTHON) $(GOOCANVAS_LIBS) $(GTK_LIBS) $(PYTHON_LIBS) EXTRA_DIST=lbg.glade $(appicon_DATA) lbg-callbacks.cc --- 86,93 ---- $(top_builddir)/utils/libcoot-utils.la \ $(top_builddir)/lidia-core/libcoot-lidia-core.la \ $(GLOB_LIBS) $(CLIPPER_LIBS) $(MMDB_LIBS) $(GSL_LIBS) \ ! $(SQLITE3_LIBS) \ ! $(RDKIT_LIBS) $(L_BOOST_PYTHON) $(GOOCANVAS_LIBS) $(GTK_LIBS) $(PYTHON_LIBS) EXTRA_DIST=lbg.glade $(appicon_DATA) lbg-callbacks.cc diff -c src/Makefile.am.ORIG src/Makefile.am *** src/Makefile.am.ORIG Sun Jun 18 12:55:13 2017 --- src/Makefile.am Sun Jun 18 12:55:22 2017 *************** *** 592,598 **** $(top_builddir)/compat/libcoot-compat.la \ $(GLOB_LIBS) \ $(RDKIT_LIBS) \ ! $(CLIPPER_LIBS) \ $(MMDB_LIBS) \ $(GSL_LIBS) --- 592,599 ---- $(top_builddir)/compat/libcoot-compat.la \ $(GLOB_LIBS) \ $(RDKIT_LIBS) \ ! $(SQLITE3_LIBS) \ ! $(CLIPPER_LIBS) \ $(MMDB_LIBS) \ $(GSL_LIBS) ciao gabriele