Hello this goes out to Andreas in particular, I completed the packaging of r-bioc-fishpond earlier this afternoon. This is a suggestion for r-bioc-tximport with some other interesting reverse-dependencies - and tximport makes problems with my rabbit data that I yet do not understand.
The package does not seem to be overly complicated, builds in cowbuilder. I just injected everything to https://salsa.debian.org/r-pkg-team/r-bioc-fishpond Many thanks Steffen -------- Forwarded Message -------- Subject: ITP: r-bioc-fishpond -- Fishpond: differential transcript and gene expression with Date: Thu, 09 Dec 2021 15:29:05 +0100 From: Steffen Moeller <moel...@debian.org> To: Debian Bug Tracking System <sub...@bugs.debian.org> Package: wnpp Severity: wishlist Subject: ITP: r-bioc-fishpond -- Fishpond: differential transcript and gene expression with Package: wnpp Owner: Steffen Moeller <moel...@debian.org> Severity: wishlist * Package name : r-bioc-fishpond Version : 2.0.1+ds Upstream Author : Anzi Zhu, * URL : https://bioconductor.org/packages/fishpond/ * License : GPL-2 Programming Lang: GNU R Description : Fishpond: differential transcript and gene expression with inferential replicates Fishpond contains methods for differential transcript and gene expression analysis of RNA-seq data using inferential replicates for uncertainty of abundance quantification, as generated by Gibbs sampling or bootstrap sampling. Also the package contains utilities for working with Salmon and Alevin quantification files. Remark: This package is maintained by Debian R Packages Maintainers at https://salsa.debian.org/r-pkg-team/r-bioc-fishpond
