hi, Le 29/05/2020 à 10:10, Andreas Tille a écrit : > >> In test/CMakeLists.txt, there is a reference to them as >> "${CMAKE_BINARY_DIR}/contigs_depth.txt", but it should be >> "${CMAKE_CURRENT_SOURCE_DIR}/contigs_depth.txt", unless the text files >> should be copied while building, but that doesn't seem the case. > > I'll check upstream Git or file an issue about this. > > Unfortunately your patch did not applied cleanly - no idea why. I have > added it manually and reread your explanation which I think are > implemented correctly. Unfortunately in my pbuilder I get the same > cmake failure as before and since I think I've now understand the issue > I'm even more in vain since its not working anyway for me but you > confirmed that it should work. Could you be so kind to have another > look on the latest state in Git?
I've looked at your commit on git, and the issue is that you need to remove both "add_dependencies" completely in src/CMakeLists.txt. zlib and htslib targets doesn't exist anymore as they were created by scripts in cmake/ folder. > > Thanks again > > Andreas. > -- Alexis Murzeau PGP: B7E6 0EBB 9293 7B06 BDBC 2787 E7BD 1904 F480 937F