On 7/7/2020 3:14 AM, Ellen Ji wrote:
External Email - Use Caution
Dear experts,
I am running bbregister and have a couple questions:
1) I am using freesurfer version 7. My understanding is that I do not
need any --init argument anymore, and without it, by default it uses
init-coreg. Could you confirm this? (I tested the below and it seemed
fine)
bbregister --s subject1 --mov $dtipath/subject1/data.nii.gz --dti
--reg mri/register.dat
Correct, you do not need --init
2) A colleague performed recon-all using freesurfer v6. Is it ok if I
use bbregister on these subjects using freesurfer v7 or should I
install v6?
No, you can use v7 bbregister with v6 subjects
Many thanks for your input!
Ellen Ji, PhD
Postdoctoral researcher
*****
Individual Differences in Psychosis (IDP) Lab
Psychiatric University Hospital
University of Zürich
ellen...@bli.uzh.ch
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