When using the the snapshot distribution fsa-20020917.tar.gz I get the following error messages when running:
mris_convert -c thickness rh.white rh.thickness.asc MRISreadBinaryCurvature: incompatible vertex number in file ./rh.thickness the ascii file output, but all thickness values are zero: 000 12.61563 -89.76370 -3.82580 0.00000 001 11.95849 -89.71229 -3.96183 0.00000 002 10.82764 -89.53942 -4.15206 0.00000 003 10.03118 -89.17944 -3.95924 0.00000 004 14.26332 -89.59046 -5.39858 0.00000 005 13.91159 -89.66550 -4.88632 0.00000 The error file from subject/scripts reads (I am not sure from what I did to get this error, but...): MRISreadVertexPositions(/home/brian/FREESURFER_data/laura/surf/rh.thickness): surfaces differ. vset_read_vertex_set: MRISreadVertexPositions failed MRISreadVertexPositions(/home/brian/FREESURFER_data/laura/surf/rh.thickness): surfaces differ. vset_read_vertex_set: MRISreadVertexPositions failed MRISreadBinaryCurvature: incompatible vertex number in file /home/brian/FREESURFER_data/laura/surf/rh.pial MRISreadBinaryCurvature: incompatible vertex number in file /home/brian/FREESURFER_data/laura/surf/rh.inflated Am I doing something wrong and/or should I go back to an older mris_convert? thanks a bunch. brian
