This should be possible with Apache as the proxy and the mod_auth_pam
Apache module. From a high level, the configuration should be similar to
using mod_authnz_ldap or mod_auth_kerb as documented here:
https://wiki.galaxyproject.org/Admin/Config/ExternalUserDatbases

-Will


On Wed, Oct 1, 2014 at 10:03 AM, John Chilton <jmchil...@gmail.com> wrote:

> I don't know how one would do this precisely but I believe it is
> possible at the proxy level - i.e. setting up Apache to handle this
> and authenticate with system resources. I believe Tim Booth's work on
> integrating galaxy into biolinux uses system users for authentication
> by default.
>
> The following thread has more discussion on that:
> http://lists.bx.psu.edu/pipermail/galaxy-dev/2014-March/018770.html
>
> More generic information on configuring an Apache Proxy can be found here:
> https://wiki.galaxyproject.org/Admin/Config/ApacheProxy
>
> Hope this helps.
>
> -John
>
> On Tue, Sep 30, 2014 at 9:22 AM, Daniel Ruiz Molina
> <daniel.r...@aomail.uab.es> wrote:
> > Hello,
> >
> > I have configured Galaxy, but I would be very interested in configure it
> > with PAM or /etc/passwd (/etc/shadow) instead of creating a user in the
> web
> > interface.
> > How can I configure Galaxy for authenticating with system files?
> >
> > Thanks.
> > ___________________________________________________________
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