Hiram, Thanks a lot. What are the specific name of chr*.fa.gz from UCSC ftp website?
YB On Tue, 28 Jul 2009 13:19:12 -0700, Hiram Clawson <hi...@soe.ucsc.edu> wrote: > Good Afternoon YB: > > To cat all sequence together into one single fasta record: > > $ echo ">hg18" > hg18.fa > $ zcat chr*.fa.gz | sed -e "/^>/d" >> hg18.fa > > --Hiram > > Yongsheng Bai wrote: >> Hi, >> >> >> >> How to download hg18 genomic sequence in one file with one fasta line >> instead of multiple fasta lines separated by chromosomes? >> >> >> >> Thanks, >> >> YB > _______________________________________________ Genome maillist - Genome@soe.ucsc.edu https://lists.soe.ucsc.edu/mailman/listinfo/genome
