No, no overlay here. In fact I avoid overlay at any cost.
Thank you for a while!!
On 11/19/2016 12:36 PM, Michael Palimaka wrote:
On 20/11/16 01:47, Zhu Sha Zang wrote:
Hello everybody...
A single doubt here:
After an upgrade in package dev-libs/icu (from 57.1 to 58.1-r1) i tried
a package upgrade inside R and got that:
/> update.packages(checkBuilt=TRUE, ask=FALSE,
repos='http://cran.us.r-project.org')
trying URL 'http://cran.us.r-project.org/src/contrib/knitr_1.15.tar.gz'
Content type 'application/x-gzip' length 1027358 bytes (1003 KB)
==================================================
downloaded 1003 KB
* installing *source* package ‘knitr’ ...
** package ‘knitr’ successfully unpacked and MD5 sums checked
** R
** demo
** inst
** preparing package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
*unable to load shared object
'/usr/lib64/R/library/stringi/libs/stringi.so':**
** libicui18n.so.57: cannot open shared object file: No such file or
directory*
Error : unable to load R code in package ‘knitr’
ERROR: lazy loading failed for package ‘knitr’
* removing ‘/usr/lib64/R/library/knitr’
* restoring previous ‘/usr/lib64/R/library/knitr’
The downloaded source packages are in
‘/tmp/RtmpKBphr0/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages(update[instlib == l, "Package"], l, contriburl =
contriburl, :
installation of package ‘knitr’ had non-zero exit status
/
This kind of "bug" can I put inside bugs.gentoo.org or its a cran
package bug?
It is not the first time and i'm in dout about how to proceed.
Thanks anyway.
Best regards!!
//
Due to the dev-libs/icu upgrade, the package that provides
/usr/lib64/R/library/stringi/libs/stringi.so needs to be rebuilt. I
assume you're using the R overlay, so that would be sci-CRAN/stringi.
It's possible for this rebuild to be achieved automatically in the
future, but it requires a minor modification to the stringi ebuild
(subslot operator to be added to dev-libs/icu dependency). As the R
overlay is automatically generated I'm not sure how to achieve this so
I've CCed Benda who I hope is the right person to look at this. :-)
