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> Is it /var/run/mysql or /var/run/mysqld?
> You should probably recreate /var/run/mysqld
> and set the permissions.

/var/run/mysqld must have mysql:mysql permissions (drwxr-xr-x)

> And make /etc/my.cnf a symlink to /etc/mysql/my.cnf
> CLI utilities probably look for /etc/my.cnf

No, this is not needed. CLI programs will use whatever the mysql default
is, and mysql is compiled under gentoo with /etc/mysql/my.cnf as default.

Greetings,
Ralph
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