You can use an expect script <http://en.wikipedia.org/wiki/Expect> like
this:
*set username [lrange $argv 0 0]*
*set password [lrange $argv 1 1]*
*set warDir [lrange $argv 2 2]*
*set gaeHome [lrange $argv 3 3]*
*set timeout -1*
*
*
*# spawns appcfg.sh*
*spawn $gaeHome/bin/appcfg.sh --passin --email=$username update $warDir*
*match_max 100000*
*
*
*expect {*
* default {exit 0}*
* # Look for passwod prompt*
* "*?assword*"*
*}*
*
*
*# Send password aka $password*
*send -- "$password\r"*
*
*
*# send blank line (\r) to make sure we get back to gui*
*send -- "\r"*
*expect eof*
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