Dear Matt and HCP experts,
Thanks again for this.
I have some further questions:
(1) Even if my data is 1x1x1mm^3 should it be registered to the
workbench default T1 MNI of 0.7mm or to 1x1x1mm^3?
(2) Within HCP: Is it valid to also look at white matter myelin not just
cortical myelin?
(3) Finally, does anyone know any postmortem validation studies for this
technique?
Thank you very much,
Best wishes,
Barbara Anne
On 20/02/2015 13:08, Glasser, Matthew wrote:
Please use the HCP Minimal Preprocessing Pipelines to create T1w/T2w
myelin maps with the latest code/methods (including bias correction
and normalization):
https://github.com/Washington-University/Pipelines
You will need a T1w and a T2w images acquired in the same scanning
session with the same image intensity filters (e.g. pre scan normalize
or not) applied to both. For myelin mapping only, a field map is
optional (but recommended).
Peace,
Matt.
From: Barbara Kreilkamp <bakk....@googlemail.com
<mailto:bakk....@googlemail.com>>
Date: Friday, February 20, 2015 at 7:04 AM
To: "hcp-users@humanconnectome.org
<mailto:hcp-users@humanconnectome.org>" <hcp-users@humanconnectome.org
<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] Myelin Mapping
Dear HCP- users,
Could you please point me to a tutorial for myelin mapping with Human
Connectome Workbench software?
Also, is there a way to implement bias-correction for this technique?
Thank you very much,
Best wishes,
Barbara
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