News from the Human Connectome Project (HCP) July 20, 2016
Connectome Workbench v1.2.2 Released Version 1.2.2 of Connectome Workbench (Workbench or WB) brain visualization and analysis software is now available at http://humanconnectome.org/connectome/get-connectome-workbench.html for 64-bit Mac OSX, Windows, and Linux. Version 1.2.2 of Workbench is compatible with the scene files distributed in the new Brain Analysis Library of Spatial maps and Atlases (BALSA) database<https://balsa.wustl.edu/> in conjunction with the July 20 Nature publication A multi-modal parcellation of human cerebral cortex<http://www.nature.com/nature/journal/vaop/ncurrent/full/nature18933.html>. The Workbench distribution includes wb_view, a GUI-based visualization platform, and wb_command, a command-line program for performing a variety of algorithmic tasks using volume, surface, and grayordinate data. New features in WB v1.2.2 include: wb_view: · Connectivity correlation can now be dynamically calculated from data-series files. · Upload of files to BALSA enabled. wb_command: Changes and new features: · loading a timeseries now computes correlation on any identification, use "connectivity" tab in overlay toolbox to turn off · -file-information lists data files in each scene unless -no-map-info is specified and has an added -only-metadata option · "dynconn" computation of correlation from dtseries files on the fly · -cifti-help and -gifti-help commands added to explain file formats · -cifti-change-mapping command deprecates -cifti-copy-mapping, -cifti-change-timestep, and -cifti-convert-to-scalar · -scene-file-merge added Bug fixes: · fixed gifti external binary reading on windows · non-XYZ-oriented volumes now display properly in Volume view mode · fix reading of uncompressed volume files with frames larger than 2GiB · some crashes when interacting with layers after opening wb_view without data files · -spec- and -scene-file-relocate fixed to put relative paths in output files · *-erode commands no longer crash on multi-column files WB v1.2.2 is compatible with the WB v1.0 tutorial and the processed 900 Subjects Group Average Data available to download at http://humanconnectome.org/connectome/get-connectome-workbench.html and on the ConnectomeDB HCP project page<https://db.humanconnectome.org/data/projects/HCP_900>. Access to both datasets require ConnectomeDB login and signature of the HCP Open Access Data Use Terms. To download the WB v1.2.2 source code from GitHub<https://github.com/Washington-University/workbench>: follow the link, click releases (near the top of the page), then under v1.2.2, click the "Source code (zip)" or "Source code (tar.gz)" button. We encourage you to check out Connectome Workbench v1.2.2! Discussion of Connectome Workbench usage, bugs, and features can be posted to the hcp-users discussion list. Sign up for hcp-users at: http://humanconnectome.org/contact/#subscribe Best, The WU-Minn-Ox HCP Consortium Jennifer Elam, Ph.D. Scientific Outreach, Human Connectome Project Washington University School of Medicine Department of Neuroscience, Box 8108 660 South Euclid Avenue St. Louis, MO 63110 314-362-9387<tel:314-362-9387> e...@wustl.edu<mailto:e...@wustl.edu> www.humanconnectome.org<http://www.humanconnectome.org/> _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
