The color and alpha numbers should be integers from 0 to 255. Tim
On Mon, Dec 10, 2018 at 6:56 PM Zaixu Cui <cuizaixu19891...@gmail.com> wrote: > Hi Tim, > > Cool. Thank you so much. It works. I just used the command 'wb_command > -metric-label-import 120292_lh.func.gii '' 120292_lh.label.gii'. > > I set the second parameter as null and the color was created as default. > Is there an example of the text file of the label-list file. I used the > file as attachment but failed. Is there any problems with this file? > > Thank you so much. > > Best wishes > - > Zaixu > > > > On Mon, 10 Dec 2018 at 19:02, Timothy Coalson <tsc...@mst.edu> wrote: > >> If you save those vectors of values as .func.gii files (maybe this is how >> you made the .func.gii files you have?), you can use wb_command >> -metric-label-import to turn them into .label.gii files: >> >> >> https://www.humanconnectome.org/software/workbench-command/-metric-label-import >> >> To get them onto HCP surfaces, see FAQ #9 here: >> >> >> https://wiki.humanconnectome.org/display/PublicData/HCP+Users+FAQ#HCPUsersFAQ-9.HowdoImapdatabetweenFreeSurferandHCP >> ? >> >> Tim >> >> >> On Mon, Dec 10, 2018 at 5:50 PM Zaixu Cui <cuizaixu19891...@gmail.com> >> wrote: >> >>> Hi, developers, >>> >>> Thank you so much for developing such a fantastic software. I am trying >>> to visualize an atlas in FreeSurfer fsaverage5 space, but failed to create >>> *.label.gii file for my atlas. >>> >>> I have successfully converted fsaverage5 template into >>> *.midthickness.surf.gii and converted my atlas into *.func.gii file. Then, >>> workbench can display the atlas as a metric map. >>> >>> However, I need to display it as an atlas, with each region a different >>> color. So, I tried to covert the atlas into *.label.gii. My atlas is a >>> 10242*1 vector for left hemisphere and a 10242*1 vector for right >>> hemisphere. The values in the atlas range from 1 to 100. I tried a lot, but >>> failed finally. Is there a manual about how to convert a vector into >>> *.label.gii file that accepted by workbench? >>> >>> Thank you so much. >>> Best >>> - >>> Zaixu Cui, Ph.D. >>> Postdoc fellow at Department of Psychiatry, Perelman School of Medicine >>> University of Pennsylvania >>> E-mail: zaixu...@gmail.com >>> zaixu....@pennmedicine.upenn.edu >>> >>> _______________________________________________ >>> HCP-Users mailing list >>> HCP-Users@humanconnectome.org >>> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >>> >> _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
