Hello Moon There are a couple of web applications that do that, but it is not an easy task. Please, let us know in more detail what you need. For example, do you know in advance what is the sequence you want highlighted, or is this a generic need that should work with any protein?
For example, you can select a known sequence using the "select within(sequence)" command See http://chemapps.stolaf.edu/jmol/docs/#atomexpressionsfunctions or http://chemapps.stolaf.edu/jmol/docs/#atomexpressions > Functions > WITHIN and then apply whatever highlight you want: halos, spacefill, a color... Will that be enough for your needs? ------------------------------------------------------------------------------ All the data continuously generated in your IT infrastructure contains a definitive record of customers, application performance, security threats, fraudulent activity and more. Splunk takes this data and makes sense of it. Business sense. IT sense. Common sense. http://p.sf.net/sfu/splunk-d2d-oct _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers