Dear Jmol Developers List,
I am a newbie in Jmol source code. Currently I am interestedin an NERF (natural
extension reference frame) algorithm from a program whichis, for example, used
to convert a Zmatrix into Cartesian coordinates. So thatone can manipulate
bondlength, angle, dihedral plane of a chemical system quiteeasily.
>From NERF algorithm I could generate a series of geometries.For example, if I
>am interested in changing a BOND LENGTH between two atoms, aslider movement
>can generate a series of XYZ type of geometries of these process.
My question is: How I can effectively display this series of geometries inJMOL?
Actually I tried the ‘read from the file’ method in a thread. That is, in first
export the series of geometries into files and used ‘ load file1.xyz; zap;load
file2.xyz; zap…” . But then the display of changing the bond length is
actuallynot smooth and seems slow for large molecules. Actually I am looking a
smoothermethod.
Does anyone have any suggestions regarding this? Is anymethod in Jmol is
available to Update the geometry internally rather to use a series of
‘loadfilename.xyz…’
Thanks in advanceKrishna Mohan
------------------------------------------------------------------------------
Don't Limit Your Business. Reach for the Cloud.
GigeNET's Cloud Solutions provide you with the tools and support that
you need to offload your IT needs and focus on growing your business.
Configured For All Businesses. Start Your Cloud Today.
https://www.gigenetcloud.com/
_______________________________________________
Jmol-developers mailing list
Jmol-developers@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-developers
