Hello all: I am installing biomart0.7 on MySQL5 on RHEL5. There is some problem when issuing:
perl bin/configure.pl -r conf/myRegistry.xml Here is the error message: DBD::mysql::st execute failed: Table 'mymart.meta_conf__user__dm' doesn't exist at /root/biomart-perl/bin/../lib/BioMart/Configuration/MartDBLocation.pm line 210. ERROR something wrong with your registry: DBD::mysql::st execute failed: Table 'mymart.meta_conf__user__dm' doesn't exist at /root/biomart-perl/bin/../lib/BioMart/Configuration/MartDBLocation.pm line 210. Here is my myRegistry.xml: <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE MartRegistry> <MartRegistry> <MartDBLocation name = "my_mart" displayName = "My BioMart Database" databaseType = "mysql" host = "127.0.0.1" port = "3306" database = "mymart" schema = "mymart" user = "root" password = "******" visible = "1" default = "" includeDatasets = "" martUser = "" /> </MartRegistry>