Hi, I'm locally running a BioMart (v 0.7) and I'm quite amazed by it's functionality.
I loaded a set of genomic contigs into the database, which I can also access by MartView. Now I'm stuck at bringing ProServer and BioMart together with a minimal working configuration. At the moment the only attributes I have for the contig dataset, are the id's and it's sequence. I set up an importable/exportable pair so that ProServer can access the data. ProServer is then complaining with the following message: Recieved filt contigID_key Error building adaptor 'Bio::Das::ProServer::SourceAdaptor::biomart' for 'mymart1': BioMart DAS Compliant feature_keys list must contain at least id,type,method at blib/lib/Bio/Das/ProServer.pm line 794 I read that "type" could be "Chromosome", "contig", ... Does that mean I need to add a new field to my database where every entry is "contig"? Does the same apply to the "method" field? Does maybe an existing example configuration for BioMart/ProServer exist? Any help would be appreciated, Charles
