I now discovered a side effect of using the R CMD BATCH invocation
instead of the piping. With the CMD R outputs the setting of options
in the first line and the result of proc.time at the end. Perhaps not
a problem, but it does require three more typed lines per R block.
Johan
2006/7/5, Johan Sandblom <[EMAIL PROTECTED]>:
> I think some quoting is required:
>
> \def\runR
> {\executesystemcommand{texmfstart
> --ifchanged=\Rfile\space --direct R CMD BATCH
> "-q --save --restore \Rfile\space \Rfile.out"}}
>
> works here, but then I am on Linux. I think eventually Mac expertise
> may be required.
>
> Johan
>
>
> 2006/7/5, Matthew Routley <[EMAIL PROTECTED]>:
> > I can confirm that this works from the command line:
> >
> > R CMD BATCH -q --save --restore rsample-r-1.tmp rsample-r-1.tmp.out
> >
> > using the sample file from the r module. Running this command for each of
> > the r
> > segments will produce the desired output. What I haven't determined is how
> > to
> > modify the r module \runR command. Simply replacing the current \runR with
> >
> > \def\runR {\executesystemcommand{texmfstart
> > --ifchanged=\Rfile\space --direct R CMD BATCH
> > -q --save --restore \Rfile\space \Rfile.out}}
> >
> > was not successful. But I'm quite unfamilier with ConTeXt at this level.
> >
> > As far as I can determine, the appropriate .out files are not being created,
> > which the log file correctly indicates. The .tmp files are successfully
> > extracted
> > from the source file.
> >
> > Thanks for the help with this.
> >
> > Matt
> >
> >
> >
> > _______________________________________________
> > ntg-context mailing list
> > ntg-context@ntg.nl
> > http://www.ntg.nl/mailman/listinfo/ntg-context
> >
>
>
> --
> Johan Sandblom N8, MRC, Karolinska sjh
> t +46851776108 17176 Stockholm
> m +46735521477 Sweden
> "What is wanted is not the will to believe, but the
> will to find out, which is the exact opposite"
> - Bertrand Russell
>
--
Johan Sandblom N8, MRC, Karolinska sjh
t +46851776108 17176 Stockholm
m +46735521477 Sweden
"What is wanted is not the will to believe, but the
will to find out, which is the exact opposite"
- Bertrand Russell
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