Hello community, here is the log from the commit of package pymol for openSUSE:Factory checked in at 2012-03-01 17:26:22 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/pymol (Old) and /work/SRC/openSUSE:Factory/.pymol.new (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "pymol", Maintainer is "" Changes: -------- --- /work/SRC/openSUSE:Factory/pymol/pymol.changes 2011-11-14 13:30:06.000000000 +0100 +++ /work/SRC/openSUSE:Factory/.pymol.new/pymol.changes 2012-03-01 17:26:25.000000000 +0100 @@ -1,0 +2,44 @@ +Sat Feb 18 23:44:14 UTC 2012 - [email protected] + +- update to 1.5.0.2 + * stack trace when saving movie as MPEG (ID: 3488608) + * error loading from pse that don't have Crystal/Symmetry info (ID: 3488609) + +------------------------------------------------------------------- +Mon Feb 13 22:41:59 UTC 2012 - [email protected] + +- update to 1.5.0.1 release + * improved rendering Performance + * improved rendering Quality + * bg_gradient now ray traces + * improved cartoon support for non-standard nucleotides + * surface color smoothing + * surface-based picking + * frame buffer-based antialiasing for real-time rendering + * optimized anaglyph colors and intensities for an improved 3D + viewing experience + * real-time and ray-traceable ambient occlusion + * molecular weight calculuations; A > Compute > Molceular Weight + * selection generation A > Generate > Selection + * new mouse mode for repositioning lights + * many bug fixes + +------------------------------------------------------------------- +Fri Feb 10 08:54:07 UTC 2012 - [email protected] + +- license update: Python-2.0 + Use the SPDX identifier (http://www.spdx.org/licenses) + +------------------------------------------------------------------- +Wed Jan 4 20:21:01 UTC 2012 - [email protected] + +- update to svn rev 3975 + * improved callback rendering + * fixed object creation when merging two objects + * fixed get_mass + * fixed create to reorder IDs when combining objects + * Cleaned up 'fitting.py' + * alignto updated; can now take a method for alignment + * cealign updated; made faster and cleaner + +------------------------------------------------------------------- Old: ---- pymol-1.4.1.svn3971.tar.bz2 New: ---- pymol-1.5.0.2.tar.bz2 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ pymol.spec ++++++ --- /var/tmp/diff_new_pack.PoFEoG/_old 2012-03-01 17:26:27.000000000 +0100 +++ /var/tmp/diff_new_pack.PoFEoG/_new 2012-03-01 17:26:27.000000000 +0100 @@ -1,7 +1,7 @@ # # spec file for package pymol # -# Copyright (c) 2011 SUSE LINUX Products GmbH, Nuernberg, Germany. +# Copyright (c) 2012 SUSE LINUX Products GmbH, Nuernberg, Germany. # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -18,11 +18,11 @@ Name: pymol -Version: 1.4.1.svn3971 +Version: 1.5.0.2 Release: 0 Url: http://pymol.org Summary: A Molecular Viewer -License: CNRI Python License +License: Python-2.0 Group: Productivity/Scientific/Chemistry Source: %{name}-%{version}.tar.bz2 Patch0: 1_rpmroot.patch @@ -63,10 +63,9 @@ sed -i "1d" modules/pmg_tk/startup/apbs_tools.py # Remove she-bang line %build -CFLAGS="%{optflags}" python setup.py build %install -python setup.py install --prefix=%{_prefix} --root=%{buildroot} +CFLAGS="%{optflags}" python setup.py install --prefix=%{_prefix} --root=%{buildroot} PYTHONPATH=%{buildroot}%{py_sitedir} python setup2.py install --root=%{buildroot} install -D pymol %{buildroot}%{_bindir}/pymol %if 0%{?suse_version} > 1010 ++++++ 1_rpmroot.patch ++++++ --- /var/tmp/diff_new_pack.PoFEoG/_old 2012-03-01 17:26:27.000000000 +0100 +++ /var/tmp/diff_new_pack.PoFEoG/_new 2012-03-01 17:26:27.000000000 +0100 @@ -1,13 +1,9 @@ ---- setup2.py.orig 2009-04-17 09:57:26.887027924 +0200 -+++ setup2.py 2009-04-17 11:57:39.835033241 +0200 -@@ -36,16 +36,24 @@ - else: +--- setup2.py 2012-02-13 13:51:22.000000000 -0500 ++++ setup2.py 2012-02-14 11:06:16.052599028 -0500 +@@ -37,12 +37,19 @@ uninstall = 0 -+ try: - pymol_launch = 3 - import pymol + import getopt if not (os.path.exists("data") and os.path.exists("LICENSE")): @@ -18,14 +14,13 @@ + for opt, arg in opts: + if opt in ("-r", "--root"): + rpm_root = arg - pymol_file = sys.modules['pymol'].__file__ - if pymol_file[-4:]==".pyc": - pymol_file = pymol_file[0:-1] -+ inst_pymol_file = re.sub("^" + rpm_root,"/",pymol_file) + from setup3 import site_packages + pymol_file = os.path.join(site_packages, 'pymol', '__init__.py') ++ inst_pymol_file = re.sub("^" + rpm_root,"",pymol_file) + pymol_path = os.path.join(site_packages, 'pymol', 'pymol_path') - site_packages = os.path.split(os.path.split(pymol_file)[0])[0] - -@@ -107,7 +115,7 @@ + if uninstall: +@@ -101,7 +108,7 @@ if python_exe[0:2]=="./": python_exe=os.getcwd()+"/"+python_exe[2:] if sys.platform!='win32': ++++++ pymol-1.4.1.svn3971.tar.bz2 -> pymol-1.5.0.2.tar.bz2 ++++++ /work/SRC/openSUSE:Factory/pymol/pymol-1.4.1.svn3971.tar.bz2 /work/SRC/openSUSE:Factory/.pymol.new/pymol-1.5.0.2.tar.bz2 differ: char 11, line 1 -- To unsubscribe, e-mail: [email protected] For additional commands, e-mail: [email protected]
