This list really needs a reflector (ala AMBER mail reflector) so that we can benefit from each others pains. It would really be in everyone's best interest. (less repetition of answers, less asking of questions already answered!)
Just my humble opinion, (yes I realize there are other things to work on!) Mike Ford pymol-users-requ...@lists.sourceforge.net wrote: > > Send PyMOL-users mailing list submissions to > pymol-users@lists.sourceforge.net > > To subscribe or unsubscribe via the World Wide Web, visit > https://lists.sourceforge.net/lists/listinfo/pymol-users > or, via email, send a message with subject or body 'help' to > pymol-users-requ...@lists.sourceforge.net > > You can reach the person managing the list at > pymol-users-ad...@lists.sourceforge.net > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of PyMOL-users digest..." > > Today's Topics: > > 1. Color plotting of electron density contours? > (wgsc...@chemistry.ucsc.edu) > 2. RE: Color plotting of electron density contours? (DeLano, Warren) > > --__--__-- > > Message: 1 > Date: Tue, 12 Nov 2002 13:27:17 -0800 > From: wgsc...@chemistry.ucsc.edu > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] Color plotting of electron density contours? > > Hi Folks: > > Is there a way to display a cross-section of electron density > (false)-color-coded for electron density? In other words, I would like > to produce a 2-D plot that looks like a contour map (eg: output of CCP4 > npo) but color-coded with respect to electron density. A continuum, if > possible, would actually be better than a series of contour lines. > > Has this by any chance been implemented in pymol or anywhere? > > Many thanks, > > Bill Scott > > William G. Scott > > Associate Professor > Department of Chemistry and Biochemistry > and The Center for the Molecular Biology of RNA > Sinsheimer Laboratories > University of California at Santa Cruz > Santa Cruz, California 95064 > USA > > phone: +1-831-459-5367 (office) > +1-831-459-5292 (lab) > fax: +1-831-4593139 (fax) > > --__--__-- > > Message: 2 > Subject: RE: [PyMOL] Color plotting of electron density contours? > Date: Tue, 12 Nov 2002 13:54:14 -0800 > From: "DeLano, Warren" <war...@sunesis.com> > To: <wgsc...@chemistry.ucsc.edu>, > <pymol-users@lists.sourceforge.net> > > Bill, > > There has been some discussion of this desirable feature, but it doesn't = > currently exist. > > Cheers, > Warren > > > -----Original Message----- > > From: wgsc...@chemistry.ucsc.edu [mailto:wgsc...@chemistry.ucsc.edu] > > Sent: Tuesday, November 12, 2002 1:27 PM > > To: pymol-users@lists.sourceforge.net > > Subject: [PyMOL] Color plotting of electron density contours? > >=20 > >=20 > > Hi Folks: > >=20 > > Is there a way to display a cross-section of electron density =20 > > (false)-color-coded for electron density? In other words, I=20 > > would like=20 > > to produce a 2-D plot that looks like a contour map (eg:=20 > > output of CCP4=20 > > npo) but color-coded with respect to electron density. A=20 > > continuum, if=20 > > possible, would actually be better than a series of contour lines. > >=20 > > Has this by any chance been implemented in pymol or anywhere? > >=20 > > Many thanks, > >=20 > > Bill Scott > >=20 > >=20 > >=20 > > William G. Scott > >=20 > > Associate Professor > > Department of Chemistry and Biochemistry > > and The Center for the Molecular Biology of RNA > > Sinsheimer Laboratories > > University of California at Santa Cruz > > Santa Cruz, California 95064 > > USA > >=20 > > phone: +1-831-459-5367 (office) > > +1-831-459-5292 (lab) > > fax: +1-831-4593139 (fax) > >=20 > >=20 > >=20 > >=20 > > ------------------------------------------------------- > > This sf.net email is sponsored by:=20 > > To learn the basics of securing your web site with SSL,=20 > > click here to get a FREE TRIAL of a Thawte Server Certificate:=20 > > http://www.gothawte.com/rd522.html > > _______________________________________________ > > PyMOL-users mailing list > > PyMOL-users@lists.sourceforge.net > > https://lists.sourceforge.net/lists/listinfo/pymol-users > >=20 > > --__--__-- > > _______________________________________________ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users > > End of PyMOL-users Digest
