With a certain file 1za1 from pdb when I try to run apbs I get the
errors below. Other files are OK. Any suggestions?
error: 1
ValueError Exception in Tk callback
Function: <function <lambda> at 0x182892b0> (type: <type 'function'>)
Args: ()
Traceback (innermost last):
File "/Applications/MacPyMol/PyMOLX11Hybrid.app/pymol/modules/Pmw/
Pmw_1_2/lib/PmwBase.py", line 1747, in __call__
return apply(self.func, args)
File "/Applications/MacPyMol/PyMOLX11Hybrid.app/pymol/modules/Pmw/
Pmw_1_2/lib/PmwDialog.py", line 153, in <lambda>
command=lambda self=self, name=name: self._doCommand(name))
File "/Applications/MacPyMol/PyMOLX11Hybrid.app/pymol/modules/Pmw/
Pmw_1_2/lib/PmwDialog.py", line 132, in _doCommand
return command(name)
File "/Applications/MacPyMol/PyMOLX11Hybrid.app/pymol/modules/
pmg_tk/startup/apbs_tools.py", line 1111, in execute
self.runPsize()
File "/Applications/MacPyMol/PyMOLX11Hybrid.app/pymol/modules/
pmg_tk/startup/apbs_tools.py", line 1155, in runPsize
size.runPsize(pdb_filename)
File "/sw/share/xtal/bin/psize.py", line 267, in runPsize
self.parseInput(filename)
File "/sw/share/xtal/bin/psize.py", line 102, in parseInput
self.parseLines(file.readlines())
File "/sw/share/xtal/bin/psize.py", line 116, in parseLines
self.q = self.q + float(words[3])
ValueError: invalid literal for float(): 1.00101.59
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Evan R. Kantrowitz,
Ph.D
evan.kantrow...@bc.edu
Boston
College
Tel. 617-552-4558
Department of
Chemistry
FAX 617-552-2705
Merkert Chemistry Center, Rm
239 www2.bc.edu/
~kantrow
Chestnut Hill, MA 02467
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