[PyMOL] RMSD and color between two very similar structures

[Horacio Sánchez]

Hi,

Given two very similar pdb structures, do you know if it is possible to 
colour them in relationship with the RMSD between the 2 structures ? I 
mean that for instance the backbone is practically the same in both 
proteines, so it gets some same color in both, but for some chains which 
are different, the colors start to diferentiate in relation to the RMSD.

Thanks in advance

Horacio