Ok - thank you for your answer.
I was thinking if it is then possible to multiply the part of the molecule (but with new atom numbers) that I want to give the highest priority in the PDB file - would this bias the alignment towards the selected part of the molecule? Best regards Magnus From: Warren DeLano [mailto:war...@delsci.com] Sent: 19. januar 2009 23:09 To: Magnus Franzmann; pymol-users@lists.sourceforge.net Subject: RE: [PyMOL] weighted alignment Magnus, No, there isn't any provision for weighting at present, but thank you for the suggestion! Cheers, Warren _____ From: Magnus Franzmann [mailto:m...@bio.aau.dk] Sent: Monday, January 19, 2009 5:00 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] weighted alignment Dear all I would like to perform an alignment of two molecules with parts of the molecules weighted differently. Is this possible in pymol? Best regards Magnus Franzmann
