Martin,

It is remarkable that a question like this hasn't come up before, but it 
reveals a rather large whole in PyMOL's selection language:  though we have 
some proximity operators, we are not currently able to select atoms based on 
absolute or relative coordinate vector relationships.  

So the present answer to your question appears to be "no".  Sorry about that!

Cheers,
Warren

> -----Original Message-----
> From: Martin Höfling [mailto:martin.hoefl...@gmx.de] 
> Sent: Monday, March 02, 2009 11:34 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] select by absolute coordinate
> 
> I quickly checked the selection algebra and property selector 
> wiki pages and couldn't find anything related to this.
> 
> Is it possible e.g. to select all atoms with (absolute) z - 
> coordinates greater than 5A?
> 
> Best
>       Martin
> 
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