Hi Adrie, Try,
set auto_defer_atom_count, 26 Cheers, -- Jason On Tue, Aug 23, 2011 at 11:30 AM, Westphal, Adrie <[email protected]> wrote: > Hi folks, > > I have a (small) problem loading a hand made pdb file on an Apple computer > (OSX 10.6.8) running Pymol 1.4. > The pdb file involved just has a row of 27 atoms separated in X-direction by > 0.5 A. The loading takes about 30 seconds and the CPU's are in use almost 100 > % during this time. When this row contains more than 27 atoms, Pymol "hangs" > upon loading the pdb file (force quit required). > If I change the spacing to 1.0 A between the atoms, loading is as fast as it > is for real protein structures and more atoms are no problem. Upon loading > the same 0.5 A distance file in Pymol 1.3 however, I have no problems at all. > Bug? > > I attached the 0.5 A and 1.0 A pdb files. > > Cheers, > > Adrie. > > Adrie Westphal > Dept. of Biochemistry > Wageningen University > The Netherlands > > > > > ------------------------------------------------------------------------------ > Get a FREE DOWNLOAD! and learn more about uberSVN rich system, > user administration capabilities and model configuration. Take > the hassle out of deploying and managing Subversion and the > tools developers use with it. http://p.sf.net/sfu/wandisco-d2d-2 > > _______________________________________________ > PyMOL-users mailing list ([email protected]) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/[email protected] > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) [email protected] (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Get a FREE DOWNLOAD! and learn more about uberSVN rich system, user administration capabilities and model configuration. Take the hassle out of deploying and managing Subversion and the tools developers use with it. http://p.sf.net/sfu/wandisco-d2d-2 _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
