Thank you Qiang Chen, Criss Hartzell and Adam Steinberg for your insights
on this data processing issue.

Regards,
Neena

On Sat, 24 Jul 2021 at 12:13, H. Adam Steinberg <h.adam.steinb...@gmail.com>
wrote:

> Hi Neena,
>
> When you render out of PyMOL using the button (not the command line), it
> just renders out the view window. Therefore if you make the helix fill the
> entire viewport rectangle, you will effectively render out a ‘cropped”
> image.
>
> If you turn on transparency (in the background setting), you will no
> longer have a background to worry about as PyMOL will render just the helix
> on transparency.
>
> Adam
>
> On Jul 23, 2021, at 11:57 AM, Neena Susan Eappen <neenasusan...@gmail.com>
> wrote:
>
> Hello PyMOL users,
>
> Let me clarify my question. Shown below is one example figure. There is no
> way to crop any images on Origin graphing software. For this figure, I
> cropped PyMOL peptide image files on word document and then inserted in
> Origin graph. This is time consuming.
> Is there a way to crop on PyMOL?
>
> <image.png>
> Any insight would be appreciated,
>
> Thank you, Neena
>
> On Jul 22, 2021, at 5:43 PM, Neena Susan Eappen <neenasusan...@gmail.com>
> wrote:
>
> Hello PyMOL users,
>
> I have some issues exporting images from PyMOL into a data analysis
> software called OriginLab (https://www.originlab.com/). If there is
> anyone in this mail list who integrates figures from PyMOL into Origin,
> please email me. I need some insights for data representation.
>
> Many thanks,
> Neena
>
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