Hey guys,
Does anyone have an example of a REALLY simple shell script in R.
Basically i want to run this command:
library(MASS)
wilcox.test(list1,list2,paired=TRUE,alternative=c("greater"),correct=TRUE,exact=FALSE)
in a shell script something like this:
#!/bin/bash
R
library(MASS)
for i in *.out
do
wilcox.test($i,${i/out}.out2,paired=TRUE) >> $i.out
done
that i can run on a command line this this:
sh R.sh
because i've SO many files to run this command on.
I've been googling, but i'm having trouble of just finding a simple example
explaining how to make this shell script.
Any help appreciated :)
Aoife
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