On 09.05.2012 01:14, Jeff Newmiller wrote:
I have not done this myself, but reading through your book I see no reference 
to actual sample file names. I mention this because UNIX-ish operating systems 
download the tar.gz source archives while Windows works with the zip binary 
packages, and I can't tell what files you are putting in the repository.
---------------------------------------------------------------------------
Jeff Newmiller                        The     .....       .....  Go Live...
DCN:<jdnew...@dcn.davis.ca.us>         Basics: ##.#.       ##.#.  Live Go...
                                       Live:   OO#.. Dead: OO#..  Playing
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Sent from my phone. Please excuse my brevity.

Paul Johnson<pauljoh...@gmail.com>  wrote:

I set up a local repo for testing packages. My packages are not
showing up from the repository when viewed by Linux clients. I suspect
this is a web administrator/firewall issue, but it could be I created
the repo wrongly.  I am supposed to run write_PACKAGES separately in
each R-version folder. Right?

Maybe other novices can use these scripts, if they are not wrong :)

Here's the file structure. On the file space that the Web server can
see, I create a folder "/tools/kran" and directories

bin
    macosx
         leopard
              contrib
                2.13
                2.14
                2.15

    windows
         contrib
               2.13
               2.14
               2.15
src
    contrib
               2.13
               2.14
               2.15



For source packages, you do not need the versioned subfolders and you have to have a PACKAGES (or a compressed alternative) in /src/contrib.

Uwe ligges


That's created by this:
#############################################
create_repo_tree<- function(local.repos, rversions){

    folders<-  c("/bin/windows/contrib",
"/bin/macosx/leopard/contrib", "/src/contrib")
    for(dir in folders){
        dirs<- paste(local.repos, dir, "/", rversions, sep='')
        lapply(dirs, dir.create, recursive = TRUE, showWarnings = TRUE)
    }
}

create_repo_tree("/tools/kran", c(2.13, 2.14, 2.15))
###########################################

My CRAN mirror is in a sister folder /tools/cran and that works
properly to be served at the address http://rweb.quant.ku.edu/cran.

I want our local testing thing to show at similar
http://rweb.quant.ku.edu/kran.  Supposing the Apache web server magic
is done, I *believe* the following should work.

I dropped packages in the right version folders, and I wrote a script
that goes separately to each version number folder and runs
write_PACKAGES.

### Researchers can upload
### packages into the approrpriate folder.
### Administratively, we schedule this run run every night
write_PACKAGES_wrapper<- function(local.repos) {
    require(tools)

    rversions<-  dir(path = paste(local.repos,
"/bin/windows/contrib", sep=""), full.names = TRUE)
    for (i in rversions) write_PACKAGES(dir = i, subdirs=TRUE,
type="win.binary")

#repeat
    rversions<-  dir(path = paste(local.repos,
"/bin/macosx/leopard/contrib", sep=""), full.names = TRUE)
    for (i in rversions) write_PACKAGES(dir = i, subdirs=TRUE,
type="mac.binary")

    rversions<-  dir(path = paste(local.repos, "/src/contrib",
sep=""), full.names = TRUE)
for (i in rversions) write_PACKAGES(dir = i, subdirs=TRUE,
type="source")
}


write_PACKAGES_wrapper("/tools/kran")

#############################

Right?

After running that, I do see the PACKAGES files appear under the
version number directories.

However, from the linux clients I see this:

install.packages("rockchalk", repos="http://rweb.quant.ku.edu/kran";)
Installing package(s) into
‘/home/pauljohn/R/x86_64-pc-linux-gnu-library/2.15’
(as ‘lib’ is unspecified)
Warning: unable to access index for repository
http://rweb.quant.ku.edu/kran/src/contrib
Warning message:
package ‘rockchalk’ is not available (for R version 2.15.0)

The Web administrator here suggests I've done the write_PACKAGES
incorrectly because there is no PACKAGES file in
/tools/kran/src/contrib.  But I do have PACKAGES files in the
subfolders 2.15.


However, on a windows system, it does work.

install.packages("rockchalk", repos="http://rweb.quant.ku.edu/kran";)
trying URL
'http://rweb.quant.ku.edu/kran/bin/windows/contrib/2.15/rockchalk_1.5.5.06.zip'
Content type 'application/zip' length 486682 bytes (475 Kb)
opened URL
downloaded 475 Kb

package ‘rockchalk’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
  C:\Users\pauljohn32\AppData\Local\Temp\Rtmpq0m3Id\downloaded_packages

The Web admin folks say to me, "if we did it wrong, nothing would
work. Some does, so it is your fault."

--
Paul E. Johnson
Professor, Political Science    Assoc. Director
1541 Lilac Lane, Room 504     Center for Research Methods
University of Kansas               University of Kansas
http://pj.freefaculty.org            http://quant.ku.edu

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

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