... of course, whether one **should** get them is questionable... http://www.nature.com/news/statisticians-issue-warning-over-misuse-of-p-values-1.19503#/ref-link-1
Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Fri, Apr 1, 2016 at 3:26 PM, Duncan Murdoch <murdoch.dun...@gmail.com> wrote: > On 01/04/2016 6:14 PM, John Sorkin wrote: >> How can I get the p values from a glm ? I want to get the p values so I >> can add them to a custom report >> >> >> fitwean<- >> glm(data[,"JWean"]~data[,"Group"],data=data,family=binomial(link ="logit")) >> summary(fitwean) # This lists the coefficeints, SEs, z and p >> values, but I can't isolate the pvalues. >> names(summary(fitwean)) # I see the coefficients, but not the p values >> names(fitmens) # p values are not found here. > > Doesn't summary(fitwean) give a matrix? Then it's > colnames(summary(fitwean)$coefficients) you want, not names(fitwean). > > Duncan Murdoch > > P.S. If you had given a reproducible example, I'd try it myself. > > > >> >> Thank you! >> John >> >> John David Sorkin M.D., Ph.D. >> Professor of Medicine >> Chief, Biostatistics and Informatics >> University of Maryland School of Medicine Division of Gerontology and >> Geriatric Medicine >> Baltimore VA Medical Center >> 10 North Greene Street >> GRECC (BT/18/GR) >> Baltimore, MD 21201-1524 >> (Phone) 410-605-7119 >> (Fax) 410-605-7913 (Please call phone number above prior to faxing) >> >> Confidentiality Statement: >> This email message, including any attachments, is for the sole use of the >> intended recipient(s) and may contain confidential and privileged >> information. Any unauthorized use, disclosure or distribution is prohibited. >> If you are not the intended recipient, please contact the sender by reply >> email and destroy all copies of the original message. >> ______________________________________________ >> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.