Thank you Bert, I set up a new thread on BioStars [1]. So far, I'm a bit unfamilliar with Bioconductor (but will hopefully attend a course about it in November, which I'm kinda hyped about), other than installing and updating R packages using BiocManager .... Did you think of something else than BioStars.org when saying «Bioconductor?»
The question could be viewed as gene related, but I think it is really about how can one easier than with sqlite handle large tsv files, and why is that parser thing so slow ... I think this is more like a core R thing than gene related question ... [1] https://www.biostars.org/p/9492486/
signature.asc
Description: PGP signature
______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.