On 7/16/23 14:51, Maria Lathouri via R-help wrote:
Dear all,


I am having the following dataset
fc<-
ID    values    databases
Al    0.15    phreeqc
Al    0.6    carbfix
Al    0.47    actual
Ca    7.2    phreeqc
Ca    7.2    carbfix
Ca    0.3    actual
Na    14.4    phreeqc
Na    84    carbfix
Na    106    actual
Cl    22    phreeqc
Cl    21.9    carbfix
Cl    72.1    actual
Fe    0.05    phreeqc
Fe    0.43    carbfix
Fe    1.25    actual
Mg    0.35    phreeqc
Mg    0.17    carbfix
Mg    0.08    actual
SO4    0    phreeqc
SO4    0    carbfix
SO4    416    actual


As you can see, the values range from 0 to 400. I want it to plot it in bars; 
when I am plotting it as you can imagine the values near zero don't show at 
all. So I am trying to make the y axis logarithmic. I have created the 
following code but it doesn't work. I get the bars with zero above and the 
others on top.


ggplot(fc, aes(x = Temp, y = mean, fill = Glass)) +


None of those aes() names are in your data object. They should be one of

ID    values    databases


geom_bar(stat = "identity", position = "dodge", aes(y=log(mean)))

What are you intending with `

aes(y=log(mean)

`
+ theme_bw() + theme(panel.grid.major = element_blank(), panel.grid.minor = 
element_blank()) + theme(legend.position = c(0.45, 0.85), legend.title = 
element_blank())
+ scale_fill_brewer(palette = "Dark2") + scale_color_brewer(palette = "Dark2")

--

David.


I would very much appreciate your help. I am stuck.


Kind regards,
Maria

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