sten...@go.com wrote on 03/31/2009 08:11 AM:
Jeff,
Thank you so much for responding. I am ready to do a lot of tweaking.
From your message it looks like you are asking me to provide
assignments on the same line as R CMD but precede the command. I am
using bash and the usual thing would be to export those variables and
then run R CMD.
I tried that and configure ignores the variables. If you know where is
the actual makefile then I could try to finish this without using R CMD.
calling ./configure directly works ( R CMD INSTALL is the problem and I
do not know how to look into that)
bash is perfectly capable of running commands preceded with shell
variables. Show the output, please. Otherwise I'm of no help.
Best,
Jeff
Stephen C. Bond
On Mar 31, 2009, *jeff.hor...@vanderbilt.edu* wrote:
Try this:
PKG_CPPFLAGS="-I/usr/mysql/5.0/include/mysql -I/opt/csw/include
-I/usr/sfw/include -I/usr/X11/include-I/usr/lib/gtk-2.0/include
-I/usr/local/include" PKG_LIBS="-L/usr/sfw/lib
-L/usr/lib -L/usr/local/lib -L/opt/csw/lib -lmysqlclient" R CMD
INSTALL RMySQL
I had to refresh my memory from the inst/INSTALL file on how to do
this.
You might have to tweak it a bit, and also please send the full output
of the command next time.
Best,
Jeff
sten...@go.com wrote:
> I am trying to install RMySQL on OpenSolaris and need to
pass some options
> to configure.
> Tried the 3 recommended ways of doing it and nothing works,
configure
> cannot
> find the headers and the libs.
> I ran configure manually and that worked fine
> ./configure CC=cc CFLAGS="-dalign -KPIC
-xlic_lib=sunperf"
> LDFLAGS="-L/usr/sfw/lib -L/usr/lib -L/usr/local/lib
-L/opt/csw/lib"
> CPPFLAGS="-I/usr/local/lib/R/include
-I/usr/mysql/5.0/include/mysql
> -I/opt/csw/include -I/usr/sfw/include
-I/usr/X11/include
> -I/usr/lib/gtk-2.0/include
-I/usr/local/include"
> --with-mysql-inc="/usr/mysql/include/mysql"
> --with-mysql-lib="/usr/mysql/lib/mysql"
> checking mysql.h usability... yes
> checking mysql.h presence... yes
> checking for mysql.h... yes
> configure: creating ./config.status
> config.status: creating src/Makevars
> but then there is no makefile. Pls advise how to run make
manually or
> help
> with the syntax: I tried with quotes after the second = and
the first =
> and
> neither worked
> R CMD INSTALL --configure-args=CC=cc
--configure-args=CFLAGS="-dalign
> -KPIC
> -xlic_lib=sunperf" --configure-args=LDFLAGS="-L/usr/sfw/lib
-L/usr/lib
> -L/usr/local/lib -L/opt/csw/lib"
> --configure-args=CPPFLAGS="-I/usr/local/lib/R/include
> -I/usr/mysql/5.0/include/mysql -I/opt/csw/include
-I/usr/sfw/include
> -I/usr/X11/include -I/usr/lib/gtk-2.0/include
-I/usr/local/include"
> --configure-args="--with-mysql-inc=/usr/mysql/include/mysql"
> --configure-args="--with-mysql-lib=/usr/mysql/lib/mysql"
> RMySQL_0.7-3.tar.gz ## does not work
> Stephen C. Bond
> ______________________________________________
> R-help@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
http://biostat.mc.vanderbilt.edu/JeffreyHorner
--
http://biostat.mc.vanderbilt.edu/JeffreyHorner
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