Hello all, I'm trying to replicate a confirmatory factor analysis done in Amos. The idea is to compare a one-factor and a two-factor model. I get the following warning message when I run either model:
"Could not compute QR decomposition of Hessian. Optimization probably did not converge." I have no idea what to do here. I believe posters reported the same problem. It seems that the ability to invert the correlation matrix may have something to do with this error, but solve(correl) yields a solution. Here are my correlation matrix and model specifications: --------------------------- R CODE BEGIN ------------------------------------------------ correl <- matrix( c(1.0000000,-0.6657822,0.6702089,0.7997673,-0.7225454,0.8992372, -0.8026491,-0.6715168,-0.5781565,-0.6657822,1.0000000,-0.5107568, -0.5030886,0.6971188,-0.6306937,0.7200848,0.5121227,0.4496810, 0.6702089,-0.5107568,1.0000000,0.7276558,-0.3893792,0.6043672, -0.7176532,-0.5247434,-0.4670362,0.7997673,-0.5030886,0.7276558, 1.0000000,-0.6251056,0.8164190,-0.6728515,-0.6371453,-0.5531964, -0.7225454,0.6971188,-0.3893792,-0.6251056,1.0000000,-0.7760765, 0.6175124,0.5567924,0.4914176,0.8992372,-0.6306937,0.6043672, 0.8164190,-0.7760765,1.0000000,-0.7315507,-0.6625136,-0.5814590, -0.8026491,0.7200848,-0.7176532,-0.6728515,0.6175124,-0.7315507, 1.0000000,0.5910688,0.5096898,-0.6715168,0.5121227,-0.5247434, -0.6371453,0.5567924,-0.6625136,0.5910688,1.0000000,0.8106496, -0.5781565,0.4496810,-0.4670362,-0.5531964,0.4914176,-0.5814590, 0.5096898,0.8106496,1.0000000), ,nrow=9,ncol=9) rownames(correl) = c("pvote", "jmposaff", "jmnegaff", "boposaff","bonegaff", "obama.therm", "mccain.therm", "oddcand.D", "evencand.D" ) colnames(correl) = c("pvote", "jmposaff", "jmnegaff", "boposaff","bonegaff", "obama.therm", "mccain.therm", "oddcand.D", "evencand.D" ) #One Factor Model: model.all <- specify.model() allmeasures -> pvote, b1, NA allmeasures -> obama.therm, b2, NA allmeasures -> mccain.therm, b3, NA allmeasures -> jmposaff, b4, NA allmeasures -> jmnegaff, b5, NA allmeasures -> boposaff, b6, NA allmeasures -> bonegaff, b7, NA allmeasures -> oddcand.D, b8, NA allmeasures -> evencand.D, b9, NA allmeasures <-> allmeasures, NA,1 pvote <-> pvote, v1, NA obama.therm <-> obama.therm, v2, NA mccain.therm <-> mccain.therm, v3, NA jmposaff <-> jmposaff, v4, NA jmnegaff <-> jmnegaff, v5, NA boposaff <-> boposaff, v6, NA bonegaff <-> bonegaff, v7, NA oddcand.D <-> oddcand.D, v8, NA evencand.D <-> evencand.D, v9, NA sem.all <- sem(model.all, correl, 1100) summary(sem.all) #Two Factor Model: model.vi <- specify.model() verbal -> pvote, b1, NA verbal -> obama.therm, b2, NA verbal -> mccain.therm, b3, NA verbal -> jmposaff, b4, NA verbal -> jmnegaff, b5, NA verbal -> boposaff, b6, NA verbal -> bonegaff, b7, NA imp -> oddcand.D, b8, NA imp -> evencand.D, b9, NA imp <-> imp, NA, 1 verbal <-> verbal, NA, 1 pvote <-> pvote, v1, NA obama.therm <-> obama.therm, v2, NA mccain.therm <-> mccain.therm, v3, NA jmposaff <-> jmposaff, v4, NA jmnegaff <-> jmnegaff, v5, NA boposaff <-> boposaff, v6, NA bonegaff <-> bonegaff, v7, NA oddcand.D <-> oddcand.D, v8, NA evencand.D <-> evencand.D, v9, NA imp <-> verbal, civ, NA sem.vi <- sem(model.vi, correl, 1100) summary(sem.vi) --------------------------- R CODE END ------------------------------------------------ Thanks very much. -Solomon -- View this message in context: http://www.nabble.com/Confirmatory-factor-analysis-problems-using-sem-package-%28works-in-Amos%29-tp23664618p23664618.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.