If I have an object of class "phylo" in the ape, with attributes edge,
Nnode, node.label, and tip.label, is there some straightforward way for me
to extract a list of sister taxon pairs (whether the sister taxa are two
edges or an edge and a node)?
I wrote to E. Paradis (the author of ape), and he said that he didn't know
of a direct way to do this, but it may be possible through some
manipulation of the mrca functions.
Does anybody on this board have any suggestions for how to go about this?
Thank you, Max Shpak
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Max Shpak, Ph.D.
Center for Systems and Synthetic Biology
University of Texas at Austin
Austin, TX 78712
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