Dear Felipe.
It's possible that .eps doesn't support transparency. Have you tried
plotting to a different device, e.g., .pdf or .png? Alternatively, you
could undo the transparency by changing /make.transparent("blue",0.1)/
for just /"blue"/.
All the best, Liam
Liam J. Revell
Professor of Biology, University of Massachusetts Boston
Web: http://faculty.umb.edu/liam.revell/
Book: Phylogenetic Comparative Methods in R
<https://press.princeton.edu/books/phylogenetic-comparative-methods-in-r>
(/Princeton University Press/, 2022)
On 6/25/2023 12:09 AM, Felipe Rossetto wrote:
>
>
> You don't often get email from rossetto.fel...@gmail.com. Learn why
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>
> Dear all,
>
> I am including time axis in a circular phylogeny following this nice post
>
> http://blog.phytools.org/2018/02/another-technique-for-including-time.html
> <http://blog.phytools.org/2018/02/another-technique-for-including-time.html>
>
> where this loop is used to drawing arcs:
>
> for(iin1:length(obj)){a1<-0a2<-2*pidraw.arc(0,0,radius=obj[i],a1,a2,lwd=1,
> col=make.transparent("blue",0.1))}
> But when I saved the circular phylogeny in eps for further editing i
> illustrator, the arcs do not appear, and please, I would like to know
> if there is a command where it is possible to save the arcs in a eps file.
>
> Thanks a lot
>
> Felipe
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