Hello,
I've been asked to analyze a dataset of organometallic compounds (provided
in SDF), but it turns out that most of them are not compatible with RDKit
(due to having pi-alkene, pi-allyl, cyclopentadienyl et al. ligands). The
structures can be correctly represented in Marvin, though. Can anybody
point me to a toolkit (or RDKit hack) that can handle these?
Best,
Michal

====
Dr. Michal Krompiec
Adjunct Professor
School of Chemistry, University of Southampton
Highfield, Southampton SO17 1BJ, UK

and
Head of Computational Modelling | Performance Materials | Early Research
and Business Development
Merck
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