Hello again,
I actually found out, as written in the docs.
By selecting mol_send(m) instead of m in posgresql, I can access the
pickled molecule that I can restore with Chem.Mol(pkl.tobytes())
Cheers,
Jose Manuel Gally
On 11/28/18 12:56 PM, Jose Manuel Gally wrote:
Hello everyone,
I'm currently trying out the postgresql cartridge in my conda
environment [1].
To test how things work, I followed this tutorial:
https://www.rdkit.org/docs/Cartridge.html
Everything went smoothly (see notebook attached), but I am surprised
that queries return molecules not as Mol objects but as str (smiles).
Is this the expected behavior?
If so, how could I do to retrieve molecules as Mol objects instead of
smiles?
Thanks in advance for any hindsight on how to do this!
Best regards,
Jose Manuel Gally
[1] rdkit/rdkitpostgresql: 2018.09.1.0, postgresql:10.5, psycopg2: 2.7.5
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