Hi, The latest rdkit homebrew formula contains a patch that fixes an issue of the latest Q3 release. Unfortunately, the patch is not compatible with the SVN version. What you need to do is remove the patch manually by running:
$ brew edit rdkit In the editor, remove anything after line 100. Then save the file. Now run you should be good to go. Eddie On Nov 25, 2012, at 4:35 AM, venkatesh Muthukrishnan wrote: > Dear Rdkitters, > > I am also having the same problem, > > https://sourceforge.net/mailarchive/message.php?msg_id=29947598 > > but when I tried the George's solution it throws a new error …. > > venkat:~ venkat$ brew install --HEAD rdkit > ==> Checking out http://svn.code.sf.net/p/rdkit/code/trunk/ > ==> Patching > patching file CMakeLists.txt > Hunk #1 succeeded at 146 with fuzz 2 (offset -5 lines). > patching file Code/GraphMol/CMakeLists.txt > Hunk #1 FAILED at 5. > 1 out of 1 hunk FAILED -- saving rejects to file > Code/GraphMol/CMakeLists.txt.rej > patching file Code/JavaWrappers/gmwrapper/CMakeLists.txt > Hunk #1 FAILED at 74. > 1 out of 1 hunk FAILED -- saving rejects to file > Code/JavaWrappers/gmwrapper/CMakeLists.txt.rej > Error: Failure while executing: /usr/bin/patch -f -p1 -i 000-homebrew.diff > > Any ideas ?? > > Thanks, > > Venkat > ------------------------------------------------------------------------------ > Monitor your physical, virtual and cloud infrastructure from a single > web console. Get in-depth insight into apps, servers, databases, vmware, > SAP, cloud infrastructure, etc. Download 30-day Free Trial. > Pricing starts from $795 for 25 servers or applications! > http://p.sf.net/sfu/zoho_dev2dev_nov > _______________________________________________ > Rdkit-discuss mailing list > Rdkit-discuss@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/rdkit-discuss ------------------------------------------------------------------------------ Keep yourself connected to Go Parallel: VERIFY Test and improve your parallel project with help from experts and peers. http://goparallel.sourceforge.net _______________________________________________ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
