height has been deprecated.
but, it works!
thanks, paul!!!
paul
From: Paul Emsley <pems...@mrc-lmb.cam.ac.uk>
To: rdkit-discuss@lists.sourceforge.net,
Date: 25.09.2014 19:32
Subject: Re: [Rdkit-discuss] PandasTools on Windows iPython
notebook
On 25/09/14 18:06, paul.czodrow...@merckgroup.com wrote:
Dear RDKitter,
on my new Windows laptop, I run into this issue:
"
import pandas as pd
import rdkit.Chem as Chem
from rdkit.Chem import PandasTools
"
=>
"
ValueError Traceback (most recent call
last)
<ipython-input-6-52de9e808c94> in <module>()
1 import pandas as pd
2 import rdkit.Chem as Chem
----> 3 from rdkit.Chem import PandasTools
4 #import os
5 #from rdkit import RDConfig
C:\RDKit_2013_06_1\rdkit\Chem\PandasTools.py in <module>()
87 import pandas as pd
88 if 'display.width' in pd.core.config._registered_options:
---> 89 pd.set_option('display.width',100000000000)
90 if 'display.height' in pd.core.config._registered_options:
91 pd.set_option('display.height',100000000000)
C:\Users\m163729\AppData\Local\Continuum\Anaconda\lib\site-packages\pandas\core\config.py
in __call__(self, *args, **kwds)
215
216 def __call__(self, *args, **kwds):
--> 217 return self.__func__(*args, **kwds)
218
219 @property
C:\Users\m163729\AppData\Local\Continuum\Anaconda\lib\site-packages\pandas\core\config.py
in _set_option(*args, **kwargs)
116 o = _get_registered_option(key)
117 if o and o.validator:
--> 118 o.validator(v)
119
120 # walk the nested dict
C:\Users\m163729\AppData\Local\Continuum\Anaconda\lib\site-packages\pandas\core\config.py
in inner(x)
780 def inner(x):
781 if not isinstance(x, _type):
--> 782 raise ValueError("Value must be an instance of %s" %
type_repr)
783
784 return inner
ValueError: Value must be an instance of <type 'NoneType'>|<type 'int'>
"
Is this familiar to anyone?
Here's a guess:
Try changing 100000000000 to 2000000000 (2 billion) in PandaTools.py
Paul.
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