Ah got it. I think this is a 3dmol.js/py3dmol question, not an RDKit
question.
I'd suggest asking on the 3dmol.js issue tracker:
https://github.com/3dmol/3Dmol.js/issues
On Tue, Mar 28, 2017 at 4:06 PM, gosia olejniczak <
gosia.olejnic...@gmail.com> wrote:
> dear Greg,
>
> thank you for your prompt response,
> yes, that notebook works just fine,
> however if i try to call py3Dmol.view() many more times, only few windows
> appear (and they disappear as i scroll down to run cells below), example:
>
> http://nbviewer.jupyter.org/github/gosiao/test_notebooks/
> blob/master/notes_m1.ipynb
>
> best regards,
> gosia
>
>
> 2017-03-28 16:02 GMT+02:00 Greg Landrum <greg.land...@gmail.com>:
>
>> I may not have understood the question correctly: when I open that page
>> all frames are active.
>>
>> On Tue, Mar 28, 2017 at 3:56 PM, gosia olejniczak <
>> gosia.olejnic...@gmail.com> wrote:
>>
>>> hello,
>>>
>>> i'm using rdkit with py3Dmol in jupyter notebook, as in this example:
>>> http://nbviewer.jupyter.org/github/greglandrum/rdkit_blog/bl
>>> ob/master/notebooks/Trying%20py3Dmol.ipynb
>>>
>>> is there a limit of how many py3Dmol.view() frames can be in one
>>> notebook?
>>> i'm asking because it seems that jupyter notebook can handle only a
>>> limited number of these: with running all cells, even one-by-one, only the
>>> last few frames are visible and the view of the first ones disappear,
>>> restarting does not help.
>>>
>>> can that be changed somewhere?
>>> thank you and best regards,
>>> gosia
>>>
>>> ------------------------------------------------------------
>>> ------------------
>>> Check out the vibrant tech community on one of the world's most
>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>> _______________________________________________
>>> Rdkit-discuss mailing list
>>> Rdkit-discuss@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
>>>
>>>
>>
>
------------------------------------------------------------------------------
Check out the vibrant tech community on one of the world's most
engaging tech sites, Slashdot.org! http://sdm.link/slashdot
_______________________________________________
Rdkit-discuss mailing list
Rdkit-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
