If it is anything more than a small amount of data, you might consider
Connectome in a Box.
Peace,
Matt.
From:
>
on behalf of Xavier Guell Paradis >
Date: Friday,
Dear HCP experts,
I was wondering if it is possible to download HCP data directly to a shared
computing cluster (e.g. the openmind.mit.edu cluster). Since data is downloaded
via Aspera Connect, there is no link that one can copy and paste to download
data directly to the cluster.
Thank you very
Hi Xavier,
I would use the CSV file that Mike sent. Those were the subjects included in
the group average when it was done at the time of the S900 release by Mike and
others. I believe the one extra subject with complete rfMRI and tfMRI data was
added to the database after the original S900
Thank you!
I noticed (and this is also seen in the image Jenn attached) that the total
number of subjects with 100% tasks and 100% resting state is 788 (not 787,
which is the number of subjects in the S900 group average). Is there a subject
that was excluded from the S900 group average for
Mike just answered while I was writing this, but for everyone's benefit who
need to do something similar:
To get the list of subjects that were included in the S900 group average task
analysis, you need to go to the subject dashboard (click on Explore All Family
Subjects to get there from the
For the task group average maps in the S900 release, we used 787 subjects that
had 100% complete data on their resting data run and ALL tasks. A list of
those subjects is attached.
--
Michael Harms, Ph.D.
---
Conte Center for the
Hi Todd,
We processed blood and saliva samples from HCP subjects for GWAS using the
Illumina Mega Chip (has 2M multiethnic SNPs), plus three specialized Illumina
chips to look for single nucleotide polymorphisms particularly relevant to
neuroimaging studies: Psych chip, NeuroX chip, and
Dear HCP experts,
In order to get the level2 data from the individual subjects which were
included in the 900 subjects group average, should we put together the subjects
of the "S500 Release Subjects" with the "S900 New Subjects"?
Thank you,
Xavier.