Re: [R-sig-phylo] Painting clades in a fan tree with bars

2017-02-05 Thread Liam J. Revell
Hi Oscar. You need to first use paintSubTree to 'paint' each of the clades you want to label with a different state. e.g.: tree<-paintSubTree(tree,node=104,state="Asterid_1") tree<-paintSubTree(tree,node=191,state="Asterid_2") and so on. Then you should be able to use the method="plotSimmap

[R-sig-phylo] Painting clades in a fan tree with bars

2017-02-05 Thread Oscar Valverde
Hi everyone I am trying to paint different clades in a tree with a set of values on the tips. I used the function plotTree.wBars to plot and color the bars, and used node labels to define important clades in my study. However, for publication, the reviewers want me to remove the labels and use col