Nicklas Nordborg wrote:
Emmanuel Courcelle wrote:
Hello
Now using Base 2.1...
I am trying to configure the Raw Data importer plugin, to upload and
parse
genepix-type files.
1/ Pb configuring this plugin
--
I click Plugin/Configuration/New
-configuration name: bla bla
-Raw DataType: Genepix
-Next
-Test with file/Select some uploaded file/Parse the file
Then I get an error: Start of data couldn't be found. Please try again
with different settings.
In the window with the data file, I search the line marked Block Column
Raw a.s.o., (it is the nb 30 for me),
I have a box marked 'Unknown': I choose in the list Data header, I
click and this fills up the field Data header regexp
I then click again on Parse the File, this produces THE SAME error: I
tried with some other (simpler) regular expressions, same behaviour:
am I doing anything wrong ?
I don't think so. It seems strange that it can't find the data the
second time you click on Parse the file button. I really don't know
why that is happening. Most of our test data files are Genepix files
and we have not had any problems with them. I am thinking that maybe
something gets trunkated or there is a problem with different types of
linebreaks. Can you send me a few lines from a file with this problem?
If should be enough with one line of data. If your headers have
sensitive information please remove them as well.
I noticed a similar problem as Emmanuel. I choose a data header line
and tried to parse the file. It did not work so I only used the first
part of the regexp created by the wizzard. This solved the problem for
me and the wizzard could parse the file. I'll try to see if I can
reproduce this problem and report back later.
Cheers,
Jari
-
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