Bob MacCallum wrote:
Hi,
Would it be possible for the annotation importer plugin to be modified to
offer three options for item not found error handling:
skip
fail
create
instead of the current skip/fail only?
It would be possible, but The hard part is that all items are
created differently. Some properties are optional, some are not. For
some it may be possible to automatically select sensible default values,
but for others user input is required. Some properties can maybe be
mapped to columns in the file.
(or have I missed something? [always worth adding this disclaimer!])
when importing biosources, this would save a lot of GUI work
(prior to the MAGE-TAB importer being completed)
I guess this is one of the simple cases that would not be very hard to
implement. Harder cases would be LabeledExtract (which requires a
Label), PluginDefinition (which requires a plug-in JAR file).
I think a special piece of code is more or less required for every type
of item and in some cases, like the PluginDefinition, it will not be
possible to have a 'create' option at all.
So, in principle it is possibly to have a 'create' option, but all cases
are special cases and require special code. I guess this falls under the
'contributions are welcome' paragraph.
/Nicklas
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